NOR-WGS: Improved infrastructure for whole genome sequencing

The project is organized into 7 work packages (Figure 1), where the bulk of the work will be performed in work packages 5-7.

In work package (WP) 5 we will digitalize the whole genome sequencing (NGS) laboratory analyses. This includes accepting electronic requisitions, connecting lab instruments to a centralized computer database (LIMS), and electronic reporting of NGS results.

In WP6 we will develop new NGS protocols and methods for microbial agents that have the potential to create severe outbreaks or disease. To strengthen our preparedness, we will also attempt to develop NGS protocols for new and unknown agents.

In WP7 we will develop computational tools for analysis, visualization, and sharing of NGS data. We will integrate the analysis tools with the database (LIMS) from WP5 for a coherent flow from sample registration, lab work, and analyses.