Jon Bohlin
Senior scientist
Contact
Department
Responsibilities
Bioinformatics, mathematical/statistical modelling, machine learning, infectious disease genomics, genetics, epidemiology and human epigenetics
Projects and publications
- Jon Bohlin, Siri Eldevik Håberg, Per Minor Magnus, Håkon K. Gjessing, (2024). MinLinMo: a minimalist approach to variable selection and linear model prediction. BMC Bioinformatics doi: 10.1186/s12859-024-06000-4
- Jon Bohlin, John Pettersson, (2024). Compression rates of microbial genomes are associated with genome size and base composition. Genomics & Informatics doi: 10.1186/s44342-024-00018-z
- Janina Krambrich, Filip Mihalič, Michael W. Gaunt, Jon Bohlin, Jenny C. Hesson, Åke Lundkvist, Xavier de Lamballerie, Cixiu Li, Weifeng Shi, John Pettersson, (2024). The evolutionary and molecular history of a chikungunya virus outbreak lineage. PLoS Neglected Tropical Diseases doi: 10.1371/journal.pntd.0012349
- Kristina Salontaji, Kristine Løkås Haftorn, Faye Sanders, Christian Magnus Page, Esther Walton, Janine F. Felix, Mona Bekkhus, Jon Bohlin, Henning Tiemeier, Charlotte A. M. Cecil, (2024). Gestational epigenetic age and ADHD symptoms in childhood: a prospective, multi-cohort study. Molecular Psychiatry s. 2911-2918. doi: 10.1038/s41380-024-02544-2
- Annette Onken, Sabrina John Moyo, Mohammed Khamis Miraji, Jon Bohlin, Msafiri Marijani, Joel Manyahi, Kibwana Omar Kibwana, Fredrik Müller, Pål Jenum, Khamis Ali Abeid, Marianne Reimers, Nina Langeland, Kristine Mørch, Bjørn Blomberg, (2024). Predominance of multidrug-resistant Salmonella Typhi genotype 4.3.1 with low-level ciprofloxacin resistance in Zanzibar. PLoS Neglected Tropical Diseases s. 1-17. doi: 10.1371/journal.pntd.0012132
- Kristine Løkås Haftorn, Julia Romanowska, Yunsung Lee, Christian Magnus Page, Per Minor Magnus, Siri Eldevik Håberg, Jon Bohlin, Astanand Jugessur, William Robert Paul Denault, (2023). Stability selection enhances feature selection and enables accurate prediction of gestational age using only five DNA methylation sites. Clinical Epigenetics doi: 10.1186/s13148-023-01528-3
- Kristine Løkås Haftorn, William Robert Paul Denault, Yunsung Lee, Christian Magnus Page, Julia Romanowska, Robert Lyle, Øyvind Erik Næss, Dana Kristjansson, Per Minor Magnus, Siri Eldevik Håberg, Jon Bohlin, Astanand Jugessur, (2023). Nucleated red blood cells explain most of the association between DNA methylation and gestational age. Communications Biology doi: 10.1038/s42003-023-04584-w
- Julia Romanowska, Haakon Nustad, Christian Magnus Page, William Robert Paul Denault, Jon Bohlin, Yunsung Lee, maria magnus, Kristine Løkås Haftorn, Miriam Gjerdevik, Boris Novakovic, Richard Saffrey, Håkon Gjessing, Robert Lyle, Per Magnus, Siri Eldevik Håberg, Astanand Jugessur, (2022). The X-factor in ART: does the use of Assisted Reproductive Technologies influence DNA methylation on the X chromosome?. bioRxiv doi: 10.1101/2022.10.06.510603
- Dana Kristjansson, Theodore Schurr, Jon Bohlin, Astanand Jugessur, (2022). Phylogeographic history of mitochondrial haplogroup J in Scandinavia. American Journal of Biological Anthropology (AJBA) s. 298-315. doi: 10.1002/ajpa.24666
- Jon Bohlin, (2022). A simple stochastic model describing the evolution of genomic GC content in asexually reproducing organisms. Scientific Reports s. 1-10. doi: 10.1038/s41598-022-21709-z
- William Robert Paul Denault, Jon Bohlin, Christian Magnus Page, Stephen Burgess, Astanand Jugessur, (2022). Cross-fitted instrument: A blueprint for one-sample Mendelian randomization. PLoS Computational Biology doi: 10.1371/journal.pcbi.1010268
- Jon Bohlin, Christian Magnus Page, Yunsung Lee, John H.-O. Pettersson, Astanand Jugessur, Per Minor Magnus, Siri Eldevik Håberg, (2022). Age and sex effects on DNA methylation sites linked to genes implicated in severe COVID-19 and SARS-CoV-2 host cell entry. PLOS ONE doi: 10.1371/journal.pone.0269105
- Yunsung Lee, Jon Bohlin, Christian Magnus Page, Haakon Egdetveit Nustad, Jennifer Ruth Harris, Per Minor Magnus, Astanand Jugessur, Maria Christine Magnus, Siri Eldevik Håberg, Hans Ivar Hanevik, (2022). Associations between epigenetic age acceleration and infertility. Human Reproduction s. 2063-2074. doi: 10.1093/humrep/deac147
- Dana Kristjansson, Jon Bohlin, Truc Trung Nguyen, Astanand Jugessur, Theodore G. Schurr, (2022). Evolution and dispersal of mitochondrial DNA haplogroup U5 in Northern Europe: insights from an unsupervised learning approach to phylogeography. BMC Genomics doi: 10.1186/s12864-022-08572-y
- Siri Eldevik Håberg, Christian Magnus Page, Yunsung Lee, Haakon Egdetveit Nustad, Maria Christine Magnus, Kristine Løkås Haftorn, Ellen Øen Carlsen, William Robert Paul Denault, Jon Bohlin, Astanand Jugessur, Per Minor Magnus, Håkon Kristian Gjessing, Robert Lyle, (2022). DNA methylation in newborns conceived by assisted reproductive technology. Nature Communications s. 1-12. doi: 10.1038/s41467-022-29540-w
- Sebastian Duchene, Leo Featherstone, Birgitte Freiesleben de Blasio, Edward C. Holmes, Jon Bohlin, John H.-O. Pettersson, (2022). Assessment of Coronavirus Disease 2019 Intervention Strategies in the Nordic Countries Using Genomic Epidemiology. Open Forum Infectious Diseases s. 1-6. doi: 10.1093/ofid/ofab665
- Kristian Alfsnes, Nina Lagerqvist, Sirkka Vene, Jon Bohlin, Jenny Verner-Carlsson, David Ekqvist, Andreas Bråve, Edward C. Holmes, Weifeng Shi, John H.-O. Pettersson, (2021). Retrospective meta-transcriptomic identification of severe dengue in a traveller returning from Africa to Sweden, 1990. One Health doi: 10.1016/j.onehlt.2021.100217
- Sebastián Duchêne, Leo Featherstone, Birgitte Freiesleben de Blasio, Edward C Holmes, Jon Bohlin, John H.-O. Pettersson, (2021). The impact of public health interventions in the Nordic countries during the first year of SARS-CoV-2 transmission and evolution. Eurosurveillance doi: 10.2807/1560-7917.ES.2021.26.44.2001996
- Silje Ramstad, Yngvild Wasteson, Bjørn-Arne Lindstedt, Arne Michael Taxt, Jørgen Bjørnholt, Lin Cathrine T. Brandal, Jon Bohlin, (2021). Characterization of Shiga toxin 2a encoding bacteriophages isolated from high-virulent O145:H25 Shiga toxin-producing Escherichia coli. Frontiers in Microbiology doi: 10.3389/fmicb.2021.728116
- Kristine Løkås Haftorn, Yunsung Lee, William Robert Paul Denault, Christian Magnus Page, Haakon Egdetveit Nustad, Robert Lyle, Håkon Kristian Gjessing, Anni Malmberg, Maria Christine Magnus, Øyvind Erik Næss, Darina Czamara, Katri Räikkönen, Jari Lahti, Per Minor Magnus, Siri Eldevik Håberg, Astanand Jugessur, Jon Bohlin, (2021). An EPIC predictor of gestational age and its application to newborns conceived by assisted reproductive technologies. Clinical Epigenetics doi: 10.1186/s13148-021-01055-z
- Andreas Lervik, Simen Forr Toverud, Jon Bohlin, Henning Andreas Haga, (2021). Macrocirculatory Parameters and Oxygen Debt Indices in Pigs During Propofol Or Alfaxalone Anesthesia When Subjected to Experimental Stepwise Hemorrhage. Frontiers in Veterinary Science s. 1-9. doi: 10.3389/fvets.2021.664112
- Dana Kristjansson, Jon Bohlin, Astanand Jugessur, Theodore G. Schurr, (2021). Matrilineal diversity and population history of Norwegians. American Journal of Physical Anthropology s. 120-133. doi: 10.1002/ajpa.24345
- Yunsung Lee, Kristine Løkås Jacobsen, William Robert Paul Denault, Haakon Egdetveit Nustad, Christian Page, Robert Lyle, Sindre Lee-Ødegård, Gunn-Helen Moen, Rashmi B. Prasad, Leif C. Groop, Line Sletner, Christine Sommer, Maria Christine Magnus, Håkon K. Gjessing, Jennifer Ruth Harris, Per Magnus, Siri Eldevik Håberg, Astanand Jugessur, Jon Bohlin, (2020). Blood-based epigenetic estimators of chronological age in human adults using DNA methylation data from the Illumina MethylationEPIC array. BMC Genomics doi: 10.1186/s12864-020-07168-8
- Ruiyun Li, Amany Adel, Jon Bohlin, Åke Lundkvist, Björn Olsen, John H.-O. Pettersson, Mahmoud M. Naguib, (2020). Phylogeographic Dynamics of Influenza A(H9N2) Virus Crossing Egypt. Frontiers in Microbiology doi: 10.3389/fmicb.2020.00392
- Sebastián Duchêne, Leo Featherstone, Birgitte Freiesleben de Blasio, Edward C. Holmes, Jon Bohlin, John H.-O. Pettersson, (2020). The impact of early public health interventions on SARS-CoV-2 transmission and evolution. medRxiv doi: 10.1101/2020.11.18.20233767
- Kristian Alfsnes, Vegard Eldholm, Anne Olaug Olsen, Ola Brønstad Brynildsrud, Jon Bohlin, Martin Steinbakk, Dominique A Caugant, (2020). Genomic epidemiology and population structure of Neisseria gonorrhoeae in Norway, 2016–2017. Microbial Genomics doi: 10.1099/mgen.0.000359
- Jon Bohlin, Brittany Rose, Ola Brønstad Brynildsrud, Birgitte Freiesleben de Blasio, (2020). A simple stochastic model describing genomic evolution over time of GC content in microbial symbionts. Journal of Theoretical Biology s. 1-8. doi: 10.1016/j.jtbi.2020.110389
- Jon Bohlin, Brittany Rose, John H.-O. Pettersson, (2019). Estimation of AT and GC content distributions of nucleotide substitution rates in bacterial core genomes. Big Data Analytics doi: 10.1186/s41044-019-0042-7
- Jon Bohlin, Brittany Rose, Ola Brønstad Brynildsrud, Birgitte Freiesleben De Blasio, (2019). A simple stochastic model to describe the evolutionover time of core genome SNP GC content inprokaryotes. arXiv.org
- Solveig Engebretsen, Jon Bohlin, (2019). Statistical predictions with glmnet. Clinical Epigenetics doi: 10.1186/s13148-019-0730-1
- Yunsung Lee, Sanaa Choufani, Rosanna Weksberg, Samantha L. Wilson, Victor Yuan, Amber Burt, Carmen Marsit, Ake T. Lu, Beate Ritz, Jon Bohlin, Håkon K. Gjessing, Jennifer Ruth Harris, Per Magnus, Alexandra M. Binder, Wendy P. Robinson, Astanand Jugessur, Steve Horvath, (2019). Placental epigenetic clocks: estimating gestational age using placental DNA methylation levels. Aging s. 4238-4253. doi: 10.18632/aging.102049
- Jon Bohlin, John H.-O. Pettersson, (2019). Evolution of genomic base composition: From single cell microbes to nulticellular animals. Computational and Structural Biotechnology Journal s. 362-370. doi: 10.1016/j.csbj.2019.03.001
- Ola Brønstad Brynildsrud, Caitlin S. Pepperell, Philip Suffys, Louis Grandjean, Johana Monteserin, Nadia Debech, Jon Bohlin, Kristian Alfsnes, John Pettersson, Ingerid Ørjansen Kirkeleite, Fatima Fandinho, Marcia Aparecida da Silva, Joao Perdigao, Isabel Portugal, Miguel Viveiros, Taane Clark, Maxine Caws, Sarah Dunstan, Phan Vuong Khac Thai, Beatriz López, Viviana Ritacco, Andrew Kitchen, Tyler S. Brown, Dick van Soolingen, Mary B. O'Neill, Kathryn E. Holt, Edward J. Feil, Barun Mathema, Francois Balloux, Vegard Eldholm, (2018). Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation. Science Advances doi: 10.1126/sciadv.aat5869
- Kristian Alfsnes, Stephan Alfons Frye, Jens Eriksson, Vegard Eldholm, Ola Brønstad Brynildsrud, Jon Bohlin, Odile B Harrison, D Hood, Martin C.J. Maiden, Tone Tonjum, Ole Herman Ambur, (2018). A genomic view of experimental intraspecies and interspecies transformation of a rifampicin-resistance allele into Neisseria meningitidis. Microbial Genomics s. 1-14. doi: 10.1099/mgen.0.000222
- Jon Bohlin, Vegard Eldholm, Ola Brønstad Brynildsrud, John Pettersson, Kristian Alfsnes, (2018). Modeling of the GC content of the substituted bases in bacterial core genomes. BMC Genomics doi: 10.1186/s12864-018-4984-3
- Ingerid Ørjansen Kirkeleite, Jon Bohlin, Lonneke Scheffer, Einar T. Weme, DIDRIK FRIMANN VESTRHEIM, (2018). Draft genome sequence of a potentially novel Streptococcus species belonging to the Streptococcus mitis group. Microbiology Resource Announcements (MRA) doi: 10.1128/genomeA.00620-18
- John Pettersson, Jon Bohlin, Myrielle Dupont-Rouzeyrol, Ola Brønstad Brynildsrud, Kristian Alfsnes, Van-Mai Cao-Lormeau, Michael W Gaunt, Andrew K Falconar, Xavier de Lamballerie, Vegard Eldholm, Didier Musso, Ernest A Gould, (2018). Re-visiting the evolution, dispersal and epidemiology of Zika virus in Asia. Emerging microbes & infections doi: 10.1038/s41426-018-0082-5
- Randi Oppermann Moe, Andreas Svarstad Flø, Jon Bohlin, Guro Vasdal, Henrik Erlandsen, Eivind Guneriussen, Elin Charlotte Sjökvist, Solveig Marie Stubsjøen, (2018). Experimental factors affecting the within- and between-individual variation of plantar foot surface temperatures in turkeys (Meleagris gallopovo) recorded with infrared thermography. Infrared physics & technology s. 381-386. doi: 10.1016/j.infrared.2018.06.035
- Tone Kristin Bjordal Johansen, Lonneke Scheffer, Veronica Klausmark Jensen, Jon Bohlin, Siri Laura Feruglio, (2018). Whole-genome sequencing and antimicrobial resistance in Brucella melitensis from a Norwegian perspective. Scientific Reports doi: 10.1038/s41598-018-26906-3
- Ola Brønstad Brynhildsrud, Vegard Eldholm, Jon Bohlin, Kennedy Uadiale, Stephen Obaro, Dominique A Caugant, (2018). Acquisition of virulence genes by a carrier strain gave rise to the ongoing epidemics of meningococcal disease in West Africa. Proceedings of the National Academy of Sciences of the United States of America (PNAS) s. 5510-5515. doi: 10.1073/pnas.1802298115
- Randi Oppermann Moe, Jon Bohlin, Andreas Svarstad Flø, Guro Vasdal, Henrik Erlandsen, Eivind Guneriussen, Elin Charlotte Sjökvist, Solveig Marie Stubsjøen, (2018). Effects of subclinical footpad dermatitis and emotional arousal on surface foot temperature recorded with infrared thermography in turkey toms (Meleagris gallopavo). Poultry Science s. 2249-2257. doi: 10.3382/ps/pey033
- Solveig Marie Stubsjøen, Kristin Sørheim, Matteo Chincarini, Jon Bohlin, Emma Brunberg, Boris Fuchs, Rupert Palme, Lise Grøva, (2018). Exploring hair cortisone concentration as a novel tool to assess chronic stress in sheep with tick-borne fever . Small Ruminant Research s. 110-119. doi: 10.1016/j.smallrumres.2018.05.009
- Per Kristian Knudsen, Karianne Wiger Gammelsrud, Kristian Alfsnes, Martin Steinbakk, Tore G Abrahamsen, Fredrik Müller, Jon Bohlin, (2018). Transfer of a bla CTX-M-1-carrying plasmid between different Escherichia coli strains within the human gut explored by whole genome sequencing analyses. Scientific Reports doi: 10.1038/s41598-017-18659-2
- Per Kristian Knudsen, Petter Brandtzæg, Ernst Arne Høiby, Jon Bohlin, Ørjan Samuelsen, Martin Steinbakk, Tore G Abrahamsen, Fredrik Müller, Karianne Wiger Gammelsrud, (2017). Impact of extensive antibiotic treatment on faecal carriage of antibiotic-resistant enterobacteria in children in a low resistance prevalence setting. PLOS ONE doi: 10.1371/journal.pone.0187618
- Gemma C Sharp, Lucas A Salas, Claire Monnereau, Catherine Allard, Paul Yousefi, Todd M. Everson, Jon Bohlin, Zongli Xu, Rae-Chi Huang, Sarah E. Reese, Cheng-Jian Xu, Nour Baïz, Cathrine Hoyo, Golareh Agha, Ritu Roy, John W. Holloway, Akram Ghantous, Simon Kebede Merid, Kelly M. Bakulski, Leanne K. Küpers, Hongmei Zhang, Rebecca C. Richmond, Christian Page, Liesbeth Duijts, Rolv T. Lie, Philip E. Melton, Judith M. Vonk, Ellen A. Nohr, ClarLynda Williams-DeVane, Karen Huen, Sheryl L. Rifas-Shiman, Carlos Ruiz-Arenas, Semira Gonseth, Faisal I. Rezwan, Zdenko Herceg, Sandra Ekström, Lisa Croen, Fahimeh Falahi, Patrice Perron, Margaret R. Karagas, Bilal M. Quraishi, Matthew Suderman, Maria Christine Magnus, Vincent W.V. Jaddoe, Jack A. Taylor, Denise Anderson, Shanshan Zhao, Henriette A. Smit, Michele J. Josey, Asa Bradman, Andrea A. Baccarelli, Mariona Bustamante, Siri Eldevik Håberg, Göran Pershagen, Irva Hertz-Picciotto, Craig Newschaffer, Eva Corpeleijn, Luigi Bouchard, Debbie A. Lawlor, Rachel L. Maguire, Lisa F. Barcellos, George Davey Smith, Brenda Eskenazi, Wilfried Karmaus, Carmen J. Marsit, Marie-France Hivert, Harold Snieder, M. Daniele Fallin, Erik Melén, Monica Cheng Munthe-Kaas, Hasan Arshad, Joseph L. Wiemels, Isabella Annesi-Maesano, Martine Vrijheid, Emily Oken, Nina Holland, Susan K. Murphy, Thorkild I.A. Sørensen, Gerard H. Koppelman, John P. Newnham, Allen J. Wilcox, Wenche Nystad, Stephanie J. London, Janine F. Felix, Caroline L. Relton, (2017). Maternal BMI at the start of pregnancy and offspring epigenome-wide DNA methylation: findings from the pregnancy and childhood epigenetics (PACE) consortium. Human Molecular Genetics s. 4067-4085. doi: 10.1093/hmg/ddx290
- John Pettersson, Mang Shi, Jon Bohlin, Vegard Eldholm, Ola Brønstad Brynildsrud, Katrine Mørk Paulsen, Åshild Kristine Andreassen, Edward C Holmes, (2017). Characterizing the virome of Ixodes ricinus ticks from northern Europe. Scientific Reports doi: 10.1038/s41598-017-11439-y
- Randi Oppermann Moe, Jon Bohlin, Andreas Svarstad Flø, Guro Vasdal, Solveig Marie Stubsjøen, (2017). Hot chicks, cold feet. Physiology and Behavior s. 42-48. doi: 10.1016/j.physbeh.2017.05.025
- Jon Bohlin, Vegard Eldholm, John Pettersson, Ola Brønstad Brynildsrud, Lars-Gustav Snipen, (2017). The nucleotide composition of microbial genomes indicates differential patterns of selection on core and accessory genomes. BMC Genomics doi: 10.1186/s12864-017-3543-7
- Vegard Eldholm, John Pettersson, Ola Brønstad Brynildsrud, Andrew Kitchen, Erik Michael Rasmussen, Troels Lillebæk, Janne Oseberg Rønning, Valeriu Crudu, ANNE TORUNN MENGSHOEL, Nadia Debech, Kristian Alfsnes, Jon Bohlin, Caitlin S. Pepperell, Francois Balloux, (2016). Armed conflict and population displacement as drivers of the evolution and dispersal of Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America (PNAS) s. 13881-13886. doi: 10.1073/pnas.1611283113
- Guro Kristine Bårnes, Paul Arne Kristiansen, Demissew Beyene, Bereket Workalemahu, Paulos Fissiha, Behailu Merdekios, Jon Bohlin, Marie-Pierre Preziosi, Abraham Aseffa, Dominique A Caugant, (2016). Prevalence and epidemiology of meningococcal carriage in Southern Ethiopia prior to implementation of MenAfriVac, a conjugate vaccine. BMC Infectious Diseases doi: 10.1186/s12879-016-1975-3
- Ola Brønstad Brynildsrud, Jon Bohlin, Lonneke Scheffer, Vegard Eldholm, (2016). Rapid scoring of genes in microbial pan-genome-wide association studies with Scoary. Genome Biology doi: 10.1186/s13059-016-1108-8
- Jon Bohlin, Siri Eldevik Håberg, Per Magnus, Sarah E Reese, Håkon K. Gjessing, Maria Christine Magnus, Christine Louise Parr, Christian Page, Stephanie J London, Wenche Nystad, (2016). Prediction of gestational age based on genome-wide differentially methylated regions. Genome Biology doi: 10.1186/s13059-016-1063-4
- Bonnie R Joubert, Herman T Den Dekker, Janine F Felix, Jon Bohlin, Symen Ligthart, Emma Beckett, Henning Tiemeier, Joyce B van Meurs, Andre G Uitterlinden, Albert Hofman, Siri Eldevik Håberg, Sarah E Reese, Marjolein J Peters, Bettina Kulle Andreassen, Eric A P Steegers, Roy Miodini Nilsen, Stein Emil Vollset, Øivind Midttun, Per Magne Ueland, Oscar H Franco, Abbas Dehghan, Johan C De Jongste, Michael C Wu, Tianyuan Wang, Shyamal D Peddada, Vincent W V Jaddoe, Wenche Nystad, Liesbeth Duijts, Stephanie J London, (2016). Maternal plasma folate impacts differential DNA methylation in an epigenome-wide meta-analysis of newborns. Nature Communications doi: 10.1038/ncomms10577
- Matthew Suderman, Lars Christian Stene, Jon Bohlin, Christian Page, Kristin Holvik, Christine Louise Parr, Maria Christine Magnus, Siri Eldevik Håberg, Bonnie R Joubert, Michael C Wu, Stephanie J London, Caroline Relton, Wenche Nystad, (2016). 25-Hydroxyvitamin D in pregnancy and genome wide cord blood DNA methylation in two pregnancy cohorts (MoBa and ALSPAC). Journal of Steroid Biochemistry and Molecular Biology s. 102-109. doi: 10.1016/j.jsbmb.2016.03.005
- Jon Bohlin, (2015). Genome expansion in bacteria: The curious case of Chlamydia trachomatis. BMC Research Notes doi: 10.1186/s13104-015-1464-6
- Solveig Marie Stubsjøen, Jon Bohlin, Ellen Dahl, Maren Knappe-Poindecker, Terje Fjeldaas, Michael Lepschy, Rupert Palme, Jan Langbein, Erik Ropstad, (2015). Assessment of chronic stress in sheep (part I): The use of cortisol and cortisone in hair as non-invasive biological markers. Small Ruminant Research s. 25-31. doi: 10.1016/j.smallrumres.2015.09.015
- Solveig Marie Stubsjøen, Maren Knappe-Poindecker, Jan Langbein, Terje Fjeldaas, Jon Bohlin, (2015). Assessment of chronic stress in sheep (part II): Exploring heart rate variability as a non-invasive measure to evaluate cardiac regulation . Small Ruminant Research s. 30-35. doi: 10.1016/j.smallrumres.2015.10.026
- Jon Bohlin, Bettina Kulle, Bonnie R Joubert, Maria Christine Magnus, Michael C. Wu, Christine Louise Parr, Siri Eldevik Håberg, Per Magnus, Sarah E. Reese, Camilla Stoltenberg, Stephanie J. London, Wenche Nystad, (2015). Effect of maternal gestational weight gain on offspring DNA methylation: a follow-up to the ALSPAC cohort study. BMC Research Notes doi: 10.1186/s13104-015-1286-6
- Ola Brønstad Brynildsrud, Lars-Gustav Snipen, Jon Bohlin, (2015). CNOGpro: detection and quantification of CNVs in prokaryotic whole-genome sequencing data. Bioinformatics s. 1708-1715. doi: 10.1093/bioinformatics/btv070
- Tahir Mehmood, Jon Bohlin, Lars Snipen, (2015). A partial least squares based procedure for upstream sequence classification in prokaryotes. IEEE/ACM Transactions on Computational Biology & Bioinformatics s. 560-567. doi: 10.1109/TCBB.2014.2366146
- Jon Bohlin, Ola Brønstad Brynildsrud, Camilla Sekse, Lars Snipen, (2014). An evolutionary analysis of genome expansion and pathogenicity in Escherichia coli. BMC Genomics doi: 10.1186/1471-2164-15-882
- Arnfinn Aunsmo, Randi Krontveit, Paul Steinar Valle, Jon Bohlin, (2014). Field validation of growth models used in Atlantic salmon farming. Aquaculture s. 249-257. doi: 10.1016/j.aquaculture.2014.03.007
- Gunvor Elise Nagel-Alne, Randi Krontveit, Jon Bohlin, Paul Steinar Valle, Eystein Skjerve, Liv Sølverød, (2014). The Norwegian Healthier Goats program—Modeling lactation curves using a multilevel cubic spline regression model. Journal of Dairy Science (JDS) s. 4166-4173. doi: 10.3168/jds.2013-7228
- Jon Bohlin, Camilla Sekse, Eystein Skjerve, Ola Brønstad Brynildsrud, (2014). Positive correlations between genomic %AT and genome size within strains of bacterial species. Environmental Microbiology Reports s. 278-286. doi: 10.1111/1758-2229.12145
- Ola Brønstad Brynildsrud, Edward J. Feil, Jon Bohlin, Santiago Castillo-Ramirez, Duncan John Colquhoun, Una McCarthy, Iveta Matejusova, Linda D. Rhodes, Gregory D. Wiens, David W. Verner-Jeffreys, (2014). Microevolution of Renibacterium salmoninarum: evidence for intercontinental dissemination associated with fish movements. The ISME Journal doi: 10.1038/ismej.2013.186
- Tammi Vesth, Asli Ismahil Özen, Sandra C. Andersen, Rolf Sommer Kaas, Oksana Lukjancenko, Jon Bohlin, Intawat Nookaew, Trudy M. Wassenaar, David Wayne Ussery, (2013). Veillonella, Firmicutes: Microbes disguised as Gram negatives. Standards in Genomic Sciences s. 431-448. doi: 10.4056/sigs.2981345
- Jon Bohlin, Ola Brønstad Brynildsrud, Tammi Vesth, Eystein Skjerve, David W. Ussery, (2013). Amino Acid Usage Is Asymmetrically Biased in AT- and GC-Rich Microbial Genomes. PLOS ONE doi: 10.1371/journal.pone.0069878
- Arne Holst-Jensen, Knut G Berdal, Yves Bertheau, Marco Bohanec, Jon Bohlin, Maher Chaouachi, Kristina Gruden, Sandrine Hamels, Esther J. Kok, A. Krech, Anja Bråthen Kristoffersen, valerie laval, Serge Leimanis, Marie Therese Løvoll, Dany Morisset, Anne Nemeth, Nina Papazova, Theo W. Prins, Jose Remacle, Petra Richl, Tom Ruttink, Isabel Taverniers, Torstein Tengs, Jeroen P. van Dijk, Doerte Wulff, Jana Zel, Haibo Zhang, Martin Znidarsic, (2012). Towards detection of unknown GMOs. s. 367-382.
- Bekele Megersa, Demelash Biffa, Fufa Abunna, Alemayehu Regassa, Jon Bohlin, Eystein Skjerve, (2012). Epidemic characterization and modeling within herd transmission dynamics of an “emerging trans-boundary” camel disease epidemic in Ethiopia. Tropical Animal Health and Production s. 1643-1651. doi: 10.1007/s11250-012-0119-z
- Camilla Sekse, Jon Bohlin, Eystein Skjerve, Gerd Elisabeth Vegarud, (2012). Growth comparison of several Escherichia coli strains exposed to various concentrations of lactoferrin using linear spline regression. Microbial Informatics and Experimentation doi: 10.1186/2042-5783-2-5
- Randi Moe, Solveig Marie Stubsjøen, Jon Bohlin, Andreas Svarstad Flø, Morten Bakken, (2012). Peripheral temperature drop in response to anticipation and consumption of a signaled palatable reward in laying hens (Gallus domesticus). Physiology and Behavior s. 527-533. doi: 10.1016/j.physbeh.2012.03.032
- Jon Bohlin, Mark W.J. van Passel, Lars Snipen, Anja Bråthen Kristoffersen, David W. Ussery, Simon P. Hardy, (2012). Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands. BMC Genomics doi: 10.1186/1471-2164-13-66
- Tahir Mehmood, Jon Bohlin, Anja Bråthen Kristoffersen, Solve Sæbø, Jonas Warringer, Lars Snipen, (2012). Exploration of multivariate analysis in microbial coding sequence modeling. BMC Bioinformatics doi: 10.1186/1471-2105-13-97
- Trine L'Abée-Lund, Hannah Joan Jørgensen, Kristin O'Sullivan, Jon Bohlin, Goro Ligård, Per Einar Granum, Toril Lindback, (2012). The highly virulent 2006 Norwegian EHEC O103:H25 outbreak strain is related to the 2011 German O104:H4 outbreak strain. PLOS ONE doi: 10.1371/journal.pone.0031413
- Torill Mørk, Jon Bohlin, Eva Fuglei, Kjetil Aasbakk, Morten Tryland, (2011). Rabies in the arctic fox population, Svalbard, Norway. Journal of Wildlife Diseases s. 945-957. doi: 10.7589/0090-3558-47.4.945
- Astrid Lauscher, Bjørn Krossøy, Petter Frost, Søren Grove, Melanie Kønig, Jon Bohlin, Knut Falk, Espen Rimstad, Lars Austbø, (2011). Immune responses in Atlantic salmon (Salmo salar) following protective vaccination against Infectious salmon anemia (ISA) and subsequent ISA virus infection. Vaccine s. 6392-6401. doi: 10.1016/j.vaccine.2011.04.074
- Jon Bohlin, (2011). Genomic Signatures in Microbes - Properties and Applications. Scientific World Journal s. 715-725. doi: 10.1100/tsw.2011.70
- Lotte Stenfors Arnesen, Per Einar Granum, Christophe Buisson, Jon Bohlin, Christina Nielsen-Leroux, (2011). Using an insect model to assess correlation between temperature and virulence in Bacillus weihenstephanensis and Bacillus cereus. FEMS Microbiology Letters s. 196-202. doi: 10.1111/j.1574-6968.2011.02229.x
- Mona Dverdal Jansen, Britt Gjerset, Ingebjørg Modahl, Jon Bohlin, (2010). Molecular epidemiology of salmonid alphavirus (SAV) subtype 3 in Norway. Virology Journal doi: 10.1186/1743-422X-7-188
- Solveig Marie Stubsjøen, Jon Bohlin, Eystein Skjerve, Paul Steinar Valle, Adroaldo José Zanella, (2010). Applying fractal analysis to heart rate time series of sheep experiencing pain. Physiology and Behavior s. 74-80. doi: 10.1016/j.physbeh.2010.04.018
- Jon Bohlin, Lars-Gustav Snipen, A Cloeckaert, Karin Lagesen, David Wayne Ussery, Anja Bråthen Kristoffersen, Jacques Godfroid, (2010). Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods. BMC Evolutionary Biology doi: 10.1186/1471-2148-10-249
- Jon Bohlin, Lars-Gustav Snipen, Simon P. Hardy, Anja Bråthen Kristoffersen, Karin Lagesen, Torunn Dønvik, Eystein Skjerve, David Wayne Ussery, (2010). Analysis of intra-genomic GC content homogeneity within prokaryotes. BMC Genomics doi: 10.1186/1471-2164-11-464
- Demelash Biffa, Eystein Skjerve, James Oloya, Asseged Bogale, Fekadu Abebe, Ulf R Dahle, Berit K Djønne, Jon Bohlin, (2010). Molecular characterization of Mycobacterium bovis isolates from Ethiopian cattle. BMC Veterinary Research doi: 10.1186/1746-6148-6-28
- Jon Bohlin, Eystein Skjerve, David W. Ussery, (2009). Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering. BMC Genomics doi: 10.1186/1471-2164-10-487
- Jon Bohlin, Simon P. Hardy, David W. Ussery, (2009). Stretches of alternating pyrimidine/purines and purines are respectively linked with pathogenicity and growth temperature in prokaryotes. BMC Genomics doi: 10.1186/1471-2164-10-346
- Torstein Tengs, Haibo Zhang, Arne Holst-Jensen, Jon Bohlin, Melinka Alonso Butenko, Anja Bråthen Kristoffersen, Hilde-Gunn Opsahl Sorteberg, Knut Gunnar Berdal, (2009). Characterization of unknown genetic modifications using high throughput sequencing and computational subtraction. BMC Biotechnology doi: 10.1186/1472-6750-9-87
- Jon Bohlin, Eystein Skjerve, David W. Ussery, (2008). Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes. BMC Genomics doi: 10.1186/1471-2164-9-104
- Jon Bohlin, Eystein Skjerve, David W. Ussery, (2008). Investigations of oligonucleotide usage variance within and between prokaryotes. PLoS Computational Biology doi: 10.1371/journal.pcbi.1000057
- Sydney Malama, Jacques Godfroid, Eystein Skjerve, Jon Bohlin, Adrian Muwonge, Tone Kristin Bjordal Johansen, John Bwalya Muma, (2013). Isolation and molecular characterisation of Mycobacterium tuberculosis complex at the human-animal interface of Namwal district, Zambia.
- Kristine Løkås Haftorn, Julia Romanowska, Yunsung Lee, Christian Magnus Page, Per Minor Magnus, Siri Eldevik Håberg, Jon Bohlin, Astanand Jugessur, William Robert Paul Denault, (2023). Stability selection enhances feature selection and enables accurate prediction of gestational age using only five DNA methylation sites..
- Jon Bohlin, Christian Magnus Page, Haakon Egdetveit Nustad, Jennifer Ruth Harris, Per Minor Magnus, Astanand Jugessur, Maria Christine Magnus, Siri Eldevik Håberg, Hans Ivar Hanevik, (2022). Associations between epigenetic age acceleration and infertility.
- Dana Kristjansson, Jon Bohlin, Truc Trung Nguyen, Astanand Jugessur, Theodore G. Schurr, (2022). Correction: Evolution and dispersal of mitochondrial DNA haplogroup U5 in Northern Europe: insights from an unsupervised learning approach to phylogeography (BMC Genomics, (2022), 23, 1, (354), 10.1186/s12864-022-08572-y). BMC Genomics doi: 10.1186/s12864-022-08696-1
- Jiaxin Ling, Thomas Persson Vinnersten, Jenny C. Hesson, Jon Bohlin, Espen Roligheten, Edward C. Holmes, John Pettersson, (2020). Identification of hepatitis C virus in the common bed bug–a potential, but uncommon route for HCV infection?. Emerging microbes & infections s. 1429-1431. doi: 10.1080/22221751.2020.1780950
- Ola Brønstad Brynildsrud, Jon Bohlin, Lonneke Scheffer, Vegard Eldholm, (2016). Erratum to: Rapid scoring of genes in microbial pan-genome-wide association studies with Scoary [Genome Biol (2016), 17, 238], DOI: 10.1186/s13059-016-1108-8. Genome Biology doi: 10.1186/s13059-016-1132-8
- Margrete Solheim, Jon Bohlin, Charlotte Rosenberg Ulstad, Jannice Schau Slettemeås, Mohammed Umaer Naseer, Ulf R Dahle, Astrid Lousie Wester, (2016). Plasmid-mediated colistin-resistant Escherichia coli detected from 2014 in Norway. International Journal of Antimicrobial Agents s. 227-228. doi: 10.1016/j.ijantimicag.2016.06.001
- Torill Mørk, Jon Bohlin, Eva Fuglei, Kjetil Åsbakk, Morten Tryland, (2011). Rabies in the arctic fox population in Svalbard, Norway.
- Camilla Sekse, Jon Bohlin, Marianne Sunde, Anne Margrete Urdahl, (2011). Characterization and comparative analysis of the pathogenicity island Locus of Enterocyte Effacement (LEE).
- Arne Holst-Jensen, Torstein Tengs, Knut G Berdal, Anja Bråthen Kristoffersen, Jon Bohlin, Haibo Zhang, Marie Therese Løvoll, Yves Bertheau, Valerie Laval, Maher Chaouachi, Dany Morisset, Kristina Gruden, Jana Zel, Jeroen van Dijk, Esther Kok, Theo Prins, Petra Richl, Anne Nemeth, Anja Krech, Doerte Wulff, Sandrine Hamels, Serge Leimanis, Jose Remacle, Isabel Taverniers, Tom Ruttink, Nina Papazova, Marco Bohanec, Martin Znidarsic, (2009). Detecting unauthorised and unknown GMOs.